genewise output
Score 220.79 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000647_2.0   24 PSGTCRSKKTWPKTFPEEELRKRLTPMQYHVTQQKGTE            
                     PSG CR+KKTWP +F +EEL+KRLTPMQYHVTQ++GTE            
                     PSGACRTKKTWPVSFSQEELKKRLTPMQYHVTQERGTE            
OMLM01009714.1:  953 ctggtaaaaatcgattcggcaaccacactcgacgagag            
                     ccgcggcaacgctgtcaaataagtcctaaatcaaggca            
                     aaaatgtggagagcctgggggaccaaggcttgggaatg            


SPP00000647_2.0   62                           AFTGKYVDNKEEGTYHCVVCGAP 
                                               AFTG++  +K+EGTY CVVCGAP 
                                S:S[agt]       AFTGEFTHHKDEGTYTCVVCGAP 
OMLM01009714.1: 1067 AGGTAGGAC  Intron 1   CAGTgtaggtaccagggatatggtggc 
                       <2-----[1069 : 1671]-2> ctcgatcaaaaagcacgttggcc 
                                               actagcattatggtcttcctgcg 


SPP00000647_2.0   86 LF                          SEKKFDSGS             
                     LF                          S  KFDSGS             
                     LF           M:S[agc]       SSTKFDSGS             
OMLM01009714.1: 1742 ttAGGTAACAG  Intron 2   TAGCtaaatgtgt             
                     tt  <2-----[1750 : 1860]-2> cgcatacgc             
                     gc                          tttatcaaa             


SPP00000647_2.0   98                           WPSFFDLINKDAIAQTDDFSYGM 
                                               WPSF DL+NK++I  +DDFSYGM 
                               G:G[ggt]        WPSFCDLLNKESITISDDFSYGM 
OMLM01009714.1: 1889 GGTAAGTT  Intron 3   CAGGTtctttgctaagtaaatggtttga 
                      <1-----[1890 : 2155]-1>  gcctgattaaactctcaatcagt 
                                               gacctctgcggaagtattcctgg 


SPP00000647_2.0  122 HRVETTCSQ                       CGAHLGHLFDDGPRPTK 
                     HRVETTCSQ                       CGAHLGHLFDDGPRPT  
                     HRVETTCSQ                       CGAHLGHLFDDGPRPTG 
OMLM01009714.1: 2227 caggaatacGTGCCAT  Intron 4   CAGtggccgcctgggcacag 
                     agtaccgga<0-----[2254 : 2462]-0>ggcatgattaagcgccg 
                     caggtcccg                       tattgacgttcgaacaa 


SPP00000647_2.0  148 KRYCINSASLSFQPKN                                  
                     +RYCINSASL+FQ K+                                  
                     QRYCINSASLAFQSKD                                  
OMLM01009714.1: 2514 ccttaatgtcgtctag                                  
                     agagtaccctctacaa                                  
                     atcctcgccgtcgcat                                  


//
Making a S in phase 2 intron
Making a S in phase 2 intron
Making a G in phase 1 intron
>OMLM01009714.1:subseq(0,7728).pep
PSGACRTKKTWPVSFSQEELKKRLTPMQYHVTQERGTESAFTGEFTHHKDEGTYTCVVCG
APLFSSSTKFDSGSGWPSFCDLLNKESITISDDFSYGMHRVETTCSQCGAHLGHLFDDGP
RPTGQRYCINSASLAFQSKD
//
>OMLM01009714.1:subseq(0,7728).[953:2561].sp
CCATCAGGAGCATGTAGGACTAAGAAGACATGGCCAGTGAGCTTCTCTCAGGAGGAGCTG
AAGAAACGCCTCACACCAATGCAGTACCATGTTACGCAGGAGAGAGGAACTGAGAGTGCA
TTCACTGGAGAGTTCACACATCATAAAGATGAGGGGACTTACACTTGTGTCGTCTGTGGG
GCCCCGTTGTTCAGCTCTAGTACTAAATTTGACTCAGGATCAGGTTGGCCATCCTTCTGT
GACCTTTTGAACAAGGAGTCAATAACGATTTCAGATGATTTCTCCTATGGGATGCACAGA
GTGGAGACTACCTGCAGCCAGTGTGGAGCTCATCTGGGACACCTGTTTGATGACGGGCCA
AGACCCACAGGACAACGTTACTGCATTAACTCGGCCTCCCTGGCTTTCCAGTCCAAAGAT
//
OMLM01009714.1:subseq(0,7728)	GeneWise	match	953	2561	220.79	+	.	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	cds	953	1068	0.00	+	0	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	intron	1069	1671	0.00	+	.	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	cds	1672	1749	0.00	+	1	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	intron	1750	1860	0.00	+	.	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	cds	1861	1889	0.00	+	1	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	intron	1890	2155	0.00	+	.	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	cds	2156	2253	0.00	+	2	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	intron	2254	2462	0.00	+	.	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
OMLM01009714.1:subseq(0,7728)	GeneWise	cds	2463	2561	0.00	+	0	OMLM01009714.1:subseq(0,7728)-genewise-prediction-1
//